Each student has different strengths and weaknesses. As such, it is important to create lessons for each student specifically. This maximizes amount learned and gained from each meeting. I have worked with several undergraduates and graduate students and have had great success in training and teaching. My education is listed below:
2010 - Dec. 2015 Ph.D. Chemistry
Department of Chemistry, The RNA Institute
University at Albany, Albany, NY
2006 - 2009 B.A. Chemistry
Marist College, Poughkeepsie, NY
Research Advisor: Dr. Neil Fitzgerald
I received my Ph.D. in chemistry at the University at Albany in December 2015, in the area of mass spectrometric applications for the elucidation of RNA modifications in whole-cell lysates, tissues, and RNA subsets. Projects that I have worked on include using direct infusion ESI and LC-MS techniques to globally profile RNA modifications; characterization of RNA modifications from several biological systems; characterization of the epitranscriptome in yeast and normal/cancerous tissues; affinity capture techniques to isolate single RNA types (mRNA, tRNA); liquid-liquid extractions; and software development. In total, this work has amounted to publications and several meeting presentations. In addition to fulfilling my research objectives, I have acted in the capacity of a lab manager and have since become a postdoctoral associate. I have obtained experience training many students, maintaining instruments/core facilities, overseen purchasing, and worked extensively on several grant proposals, publications and presentations. I have spent a number of years tutoring and mentoring multiple students. I have seen them all graduate and move on to either graduate school, successful placement in the workforce or a graduate program.
Rebecca E. Rose
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Current Address Permanent Address
534 Joslen Boulevard, Apt. 234 (concealed information) 59 Wilshire Drive
Hudson, New York 12534 (concealed information) Albany, New York 12205
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1) Education
2010 - Dec. 2015 Ph.D. Chemistry
Department of Chemistry, The RNA Institute
University at Albany, Albany, NY
Research Advisor: Dr. Daniele Fabris
2006 - 2009 B.A. Chemistry
Marist College, Poughkeepsie, NY
Research Advisor: Dr. Neil Fitzgerald
2) Academic Appointments
2016 - Postdoctoral Associate, University at Albany (SUNY)
3) Professional Activities
a) Professional organizations
Member of the American Society for Mass Spectrometry (2012- )
Member of the American Chemical Society (2006- )
b) Business activities
Graduate of the Albany Medical College Biomedical Acceleration and Commercialization Center Academy
Completed the NYS Capital Region Innovation Corp Site Program (performed over 60 customer interviews)
4) Teaching/Training Responsibilities
a) Courses taught at the University at Albany
Achm 124: General Chemistry Lab I
Achm 550A: Advanced Forensic Chemistry Lab
Achm 550B: Advanced Forensic Chemistry Lab
Achm 430: Instrumental Analysis Lab
b) Courses taught at Marist College
CHEM 131: General Chemistry I Lab
CHEM 132: General Chemistry II Lab
CHEM 215: Organic Chemistry I Lab
CHEM 216: Organic Chemistry II Lab
CHEM 355: Analytical Chemistry Lab
c) Mentored undergraduate and graduate research assistants, postdoctoral fellows, and staff:
Reza Nemati
Michael Miller
Colin Aldrich
Daniel Conley
William McIntyre
Erica Brunelle
Jennifer Giza
Manuel Pazos
Ben Bayly
Kaycie Lawson
Jaqueline Morales-Bazioli
Andy Wu
5) Publications
(5) Rose, R. E.; and Fabris, D. âMapping post-transcriptional modifications to explore the epitranscriptomeâ RNA Wires (2016) Under review.
(4) Rose, R. E.; Pazos, M. A.; Curcio, M.J.; and Fabris, D. âGlobal profiling of RNA post-transcriptional modifications as an effective tool for investigating the epitranscriptomics of stress responseâ Mol. Cell. Prot. (2016) In press.
(3) Rose, R. E.; Quinn, R; Sayre, J; and Fabris, D. âProfiling ribonucleotide modifications at full-transcriptome level: a step towards MS-based epitranscriptomicsâ RNA 21, 1-14 (2015)
(2) Quinn, R; Basanta-Sanchez, M.; Rose, R. E.; and Fabris, D. âDirect Infusion analysis of nucleotide mixtures of very similar or identical elemental compositionâ J. Mass Spectrom. 48, 703-712 (2013)
(1) Rose, R. E.; and Fitzgerald, N. âIncorporating a Forensic Science Problem-Solving Activity into an Analytical Chemistry Laboratory Courseâ The Chemical Educator 19, 319-322 (2011)
6) Proceedings Abstracts
(14) âTranscriptome wide analysis of viral immunity in killer yeastâ Lawson, K.*, McIntyre, W., Rose, R.E., Fabris, D., American Society for Microbiology Eastern New York Branch Symposium, Albany, NY (Nov. 2016)
(13) âMass spectrometry-based RNomics: advancing techniques in ion mobility and fragmentation for modified nucleic acidsâ Rebecca Rose* and Daniele Fabris, 8th Life Science Research Symposium, Albany, NY (Nov. 2016)
(12) âMS-based epitranscriptomics: new roles for ion mobility and fragmentation techniquesâ Daniele Fabris*, Jennifer Lippens, Michael Miller, William McIntyre, and Rebecca Rose, 63rd ASMS Conference on Mass Spectrometry and Allied Topics, San Antonio, TX (Jun. 2016)
(11) âMass spectrometry approaches for global and targeted surveys of ribonucleotide modifications in yeast and HeLa cellsâ J. Giza*, J. Bazioli, W. McIntyre, R. Rose and D. Fabris, symposium lecture at the SUNY Albany Biology Undergraduate Research Symposium, Albany, NY (Apr. 2015)
(10) âThe use of DNA probe hybridization techniques coupled with mass spectrometry to map ribonucleotide variants in viral genomesâ K. Lawson*, W. McIntyre, R. Rose, and D. Fabris, SUNY Albany Biology Undergraduate Research Symposium, Albany, NY (Apr. 2015)
(9) âMass spectrometry approaches for global and targeted surveys of ribonucleotide modifications in yeast and HeLa cellsâ J. Giza*, J. Bazioli, R. Rose and D. Fabris, 2nd Annual Symposium on RNA Science and its Applications, Albany, NY (Mar. 2015)
(8) âMapping ribonucleotide variants in viral genomesâ K. Lawson*, W. McIntyre, R. Rose, and D. Fabris, 2nd Annual Symposium on RNA Science and its Applications, Albany, NY (Mar. 2015)
(7) âComprehensive ribonucleotide modification maps as possible tracking tools for the multistage processes involved in cell transformation from normalcy to malignancyâ R. Rose*, J. Giza, and D. Fabris, 62nd ASMS Conference on Mass Spectrometry and Allied Topics, Baltimore, MD (Jun. 2014)
(6) âInvestigating post-transcriptional modifications of viral RNA by affinity capture and MS analysisâ W. McIntyre*, R. Rose, M. Arra, M. Canki, C. Pager, and D. Fabris, 62nd ASMS Conference on Mass Spectrometry and Allied Topics, Baltimore, MD (Jun. 2014)
(5) âMass spectrometry-based RNomics: global surveys of ribonucleotide modifications as possible indicators of metabolic and cellular stateâ R. Rose*, R. Quinn, and D. Fabris, symposium lecture at the 2013 RNA Upstate New York: Finger Lakes RNA Conference, Canandaigua, NY (Oct. 2013)
(4) âComprehensive maps of ribonucleotide modifications as possible indicators of cell identity, epigenetic, and metabolic stateâ R. Rose*, R. Quinn, D. Fabris, symposium lecture at the 61st ASMS Conference on Mass Spectrometry and Allied Topics, Minneapolis, MN (Jun. 2013)
(3) âExpanding the nuclease toolkit for the middle-down characterization of chemically modified or crosslinked RNAâ M. Scalabrin*, et al., 61st ASMS Conference on Mass Spectrometry and Allied Topics, Minneapolis, MN (Jun. 2013)
(2) âComparison of the on-line nano-LC-MS analysis of oligonucleotides by anion exchange and reverse phase chromatographyâ R. Rose*, J. Mangrum, D. Fabris, 60th ASMS Conference on Mass Spectrometry and Allied Topics, Vancouver, CA (May 2012)
(1) âToward rapid transcriptome-wide analysis of ribonucleotide modifications by high-resolution mass spectrometryâ R. Quinn*, R. Rose, B. Mangrum, D. Fabris, 60th ASMS Conference on Mass Spectrometry and Allied Topics, Vancouver, CA (May 2012)
7) Invited Lectures and Seminars
(3) Invited speaker at ASMSâs Nucleic Acids Interest Group (Jun. 2015)
(2) Seminar at Marist College, Poughkeepsie, NY (Nov. 2014)
(1) âUsing global surveys of RNA modifications to reveal the multistage processes involved in cell discrimination, metabolism and pathological stateâ R.Rose*, J. Giza, and D. Fabris, invited lecture at the Hudson Valley RNA Club, Albany, NY (Feb. 2014)
8) Awards and Stipends
(7) ASMS Student Travel Stipend. $300 for six hour work shift at annual conference. (2015)
(6) The RNA Institute Student Travel Award. $600 for conference travel expenses. (2015)
(5) ASMS Student Travel Stipend. $300 for six hour work shift at annual conference. (2014)
(4) Chemistry Graduate Student Travel Award. $500 endowment award. (2014)
(3) The RNA Institute Student Travel Award. $600 for conference travel expenses. (2013)
(2) ASMS Student Travel Stipend. $300 for six hour work shift at annual conference. (2013)
(1) Chemistry Graduate Student Travel Award. $500 endowment award.
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